nanocount
Transcript abundance estimation from Nanopore *direct-RNA sequencing* datasets
Transcript abundance estimation from Nanopore *direct-RNA sequencing* datasets
To install this package, run one of the following:
NanoCount estimates transcripts abundance from Oxford Nanopore direct-RNA sequencing datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads
Summary
Transcript abundance estimation from Nanopore *direct-RNA sequencing* datasets
Last Updated
Aug 16, 2024 at 20:04
License
MIT
Total Downloads
738
Supported Platforms
Documentation
https://a-slide.github.io/NanoCount/