kpop
An assembly-free and scalable method for the comparative analysis of microbial genomes, based on full k-mer spectra and dataset-specific transformations.
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Description
KPop is an assembly-free and scalable method for the comparative analysis of microbial genomes, based on full k-mer spectra and dataset-specific transformations. It is built using OCaml https://ocaml.org and R https://www.r-project.org/.
About
Summary
An assembly-free and scalable method for the comparative analysis of microbial genomes, based on full k-mer spectra and dataset-specific transformations.
Last Updated
Apr 13, 2024 at 17:53
License
GPL-3.0-only
Total Downloads
1.2K
Supported Platforms
linux-64
macOS-64
GitHub Repository
https://github.com/PaoloRibeca/KPop