kalamari
A curated database of completed assemblies with taxonomy IDs
A curated database of completed assemblies with taxonomy IDs
To install this package, run one of the following:
Kalamari is a curated database of assemblies and taxonomies. These assemblies are curated mainly for foodborne bacteria but have other taxa such as SARS-CoV-2 and Crytposporidium. Taxonomy has been modified from NCBI Taxonomy and has been minimalized to just what is needed here.
Summary
A curated database of completed assemblies with taxonomy IDs
Last Updated
Feb 21, 2026 at 17:56
License
MIT
Total Downloads
10.2K
Version Downloads
67
Supported Platforms
Unsupported Platforms
GitHub Repository
https://github.com/lskatz/KalamariDocumentation
https://github.com/lskatz/Kalamari/blob/master/README.md