hmftools-sage
SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.
Installation
To install this package, run one of the following:
Usage Tracking
4.2
4.1
4.0
4.0_beta
3.4.4
5 / 8 versions selected
Downloads (Last 6 months): 0
About
Summary
SAGE is a somatic SNV, MNV and small INDEL caller optimised 100x tumor / 40x normal coverage, but has a flexible set of filters that can be adapted to lower or higher depth coverage.
Last Updated
Nov 19, 2025 at 13:30
License
GPL-3.0-only
Total Downloads
38.0K
Supported Platforms
noarch