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gambitcore

Community

Tool for rapid taxonomic identification of microbial pathogens

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::gambitcore

Usage Tracking

0.0.2
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

A tool for bacterial species identification and assembly quality assessment. It evaluates assemblies by comparing their k-mer profiles against species-specific core genome references, providing both taxonomic identification and assembly completeness metrics.

About

Summary

Tool for rapid taxonomic identification of microbial pathogens

Last Updated

Apr 29, 2025 at 09:15

License

LGPL-3.0-or-later

Total Downloads

431

Supported Platforms

linux-aarch64
linux-64
macOS-arm64
macOS-64