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eastr-cpp

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Detect and remove spuriously spliced alignments from RNA-seq data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::eastr-cpp

Usage Tracking

2.0.2
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

EASTR (Emending Alignments of Spliced Transcript Reads) identifies and eliminates systematic alignment errors in multi-exon genes from RNA-seq data. This C++ implementation provides ~10x faster performance than the original Python version with identical results.

About

Summary

Detect and remove spuriously spliced alignments from RNA-seq data

Last Updated

Jan 24, 2026 at 16:07

License

MIT

Total Downloads

44

Supported Platforms

linux-64
macOS-64