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earlgrey-partea

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Pangenome transposable element annotation pipeline using EarlGrey.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::earlgrey-partea

Usage Tracking

0.1.7
0.1.6
0.1.4
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Downloads (Last 6 months): 0

Description

EarlGrey ParTEA extends EarlGrey for pangenome-scale transposable element annotation. It processes multiple genomes in parallel, performs cross-species clustering, and generates comprehensive repeat annotations.

About

Summary

Pangenome transposable element annotation pipeline using EarlGrey.

Last Updated

May 6, 2026 at 15:18

License

OSL-2.1

Supported Platforms

noarch