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comparative-annotation-toolkit

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A straightforward end-to-end pipeline that takes as input a HAL-format multiple whole genome alignment as well as a GFF3 file representing annotations on one high quality assembly in the HAL alignment, and produces a output GFF3 annotation on all target genomes chosen

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::comparative-annotation-toolkit

Usage Tracking

0.1
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About

Summary

A straightforward end-to-end pipeline that takes as input a HAL-format multiple whole genome alignment as well as a GFF3 file representing annotations on one high quality assembly in the HAL alignment, and produces a output GFF3 annotation on all target genomes chosen

Last Updated

Apr 11, 2018 at 18:47

License

Apache 2.0

Total Downloads

6.0K

Supported Platforms

linux-64
macOS-64
noarch