Tool - Filter

This tool can filter a seattle seq file. A given bed file will only select variants inside this regions. Filtering on specific fields is also possible.

Tool - MergeGenes

This tool can merge gene counts from the filter step into 1 combined matrix. Genes that are not there will be filled with 0.

Tool - MultiFilter

This tool can filter a seattle seq file. A given bed file will only select variants inside this regions. Filtering on specific fields is also possible.

For documentation and manuals visit our github.io page: https://biopet.github.io/seattleseqkit