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bioconductor-velociraptor

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Toolkit for Single-Cell Velocity

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-velociraptor

Usage Tracking

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Description

This package provides Bioconductor-friendly wrappers for RNA velocity calculations in single-cell RNA-seq data. We use the basilisk package to manage Conda environments, and the zellkonverter package to convert data structures between SingleCellExperiment (R) and AnnData (Python). The information produced by the velocity methods is stored in the various components of the SingleCellExperiment class.

About

Summary

Toolkit for Single-Cell Velocity

Last Updated

Jan 4, 2025 at 18:35

License

MIT + file LICENSE

Total Downloads

12.9K

Supported Platforms

noarch