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bioconductor-vcfarray

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Representing on-disk / remote VCF files as array-like objects

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-vcfarray

Usage Tracking

1.22.0
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1.16.0
1.14.0
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Downloads (Last 6 months): 0

Description

VCFArray extends the DelayedArray to represent VCF data entries as array-like objects with on-disk / remote VCF file as backend. Data entries from VCF files, including info fields, FORMAT fields, and the fixed columns (REF, ALT, QUAL, FILTER) could be converted into VCFArray instances with different dimensions.

About

Summary

Representing on-disk / remote VCF files as array-like objects

Last Updated

Jan 1, 2025 at 09:23

License

GPL-3

Total Downloads

21.2K

Supported Platforms

noarch