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bioconductor-triplex

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Search and visualize intramolecular triplex-forming sequences in DNA

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-triplex

Usage Tracking

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Description

This package provides functions for identification and visualization of potential intramolecular triplex patterns in DNA sequence. The main functionality is to detect the positions of subsequences capable of folding into an intramolecular triplex (H-DNA) in a much larger sequence. The potential H-DNA (triplexes) should be made of as many cannonical nucleotide triplets as possible. The package includes visualization showing the exact base-pairing in 1D, 2D or 3D.

About

Summary

Search and visualize intramolecular triplex-forming sequences in DNA

Last Updated

Dec 19, 2024 at 22:13

License

BSD_2_clause + file LICENSE

Total Downloads

48.3K

Supported Platforms

linux-64
macOS-64