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bioconductor-traviz

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Trajectory functions for visualization and interpretation.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-traviz

Usage Tracking

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Downloads (Last 6 months): 0

Description

traviz provides a suite of functions to plot trajectory related objects from Bioconductor packages. It allows plotting trajectories in reduced dimension, as well as averge gene expression smoothers as a function of pseudotime. Asides from general utility functions, traviz also allows plotting trajectories estimated by Slingshot, as well as smoothers estimated by tradeSeq. Furthermore, it allows for visualization of Slingshot trajectories using ggplot2.

About

Summary

Trajectory functions for visualization and interpretation.

Last Updated

Jul 17, 2023 at 18:24

License

MIT + file LICENSE

Total Downloads

6.0K

Supported Platforms

noarch