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bioconductor-titancna

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Subclonal copy number and LOH prediction from whole genome sequencing of tumours

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-titancna

Usage Tracking

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Description

Hidden Markov model to segment and predict regions of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH), and estimate cellular prevalence of clonal clusters in tumour whole genome sequencing data.

About

Summary

Subclonal copy number and LOH prediction from whole genome sequencing of tumours

Last Updated

Dec 31, 2024 at 13:42

License

GPL-3

Total Downloads

77.4K

Supported Platforms

linux-64
macOS-64
linux-aarch64