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bioconductor-tanggle

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Visualization of Phylogenetic Networks

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-tanggle

Usage Tracking

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Description

Offers functions for plotting split (or implicit) networks (unrooted, undirected) and explicit networks (rooted, directed) with reticulations extending. 'ggtree' and using functions from 'ape' and 'phangorn'. It extends the 'ggtree' package [@Yu2017] to allow the visualization of phylogenetic networks using the 'ggplot2' syntax. It offers an alternative to the plot functions already available in 'ape' Paradis and Schliep (2019) and 'phangorn' Schliep (2011) .

About

Summary

Visualization of Phylogenetic Networks

Last Updated

Dec 15, 2024 at 17:30

License

Artistic-2.0

Total Downloads

7.6K

Supported Platforms

noarch