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bioconductor-smite

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Significance-based Modules Integrating the Transcriptome and Epigenome

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-smite

Usage Tracking

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Description

This package builds on the Epimods framework which facilitates finding weighted subnetworks ("modules") on Illumina Infinium 27k arrays using the SpinGlass algorithm, as implemented in the iGraph package. We have created a class of gene centric annotations associated with p-values and effect sizes and scores from any researchers prior statistical results to find functional modules.

About

Summary

Significance-based Modules Integrating the Transcriptome and Epigenome

Last Updated

Dec 24, 2024 at 20:52

License

GPL (>=2)

Total Downloads

33.3K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.8.0
macOS-64 Last supported version: 1.6.0