bioconductor-simbu
Simulate Bulk RNA-seq Datasets from Single-Cell Datasets
Simulate Bulk RNA-seq Datasets from Single-Cell Datasets
To install this package, run one of the following:
SimBu can be used to simulate bulk RNA-seq datasets with known cell type fractions. You can either use your own single-cell study for the simulation or the sfaira database. Different pre-defined simulation scenarios exist, as are options to run custom simulations. Additionally, expression values can be adapted by adding an mRNA bias, which produces more biologically relevant simulations.
Summary
Simulate Bulk RNA-seq Datasets from Single-Cell Datasets
Last Updated
Dec 22, 2024 at 15:26
License
GPL-3 + file LICENSE
Total Downloads
4.2K
Supported Platforms