CMD + K

bioconductor-sigspack

Community

Mutational Signature Estimation for Single Samples

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-sigspack

Usage Tracking

1.20.0
1.16.0
1.14.0
1.12.0
1.8.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

Single sample estimation of exposure to mutational signatures. Exposures to known mutational signatures are estimated for single samples, based on quadratic programming algorithms. Bootstrapping the input mutational catalogues provides estimations on the stability of these exposures. The effect of the sequence composition of mutational context can be taken into account by normalising the catalogues.

About

Summary

Mutational Signature Estimation for Single Samples

Last Updated

Dec 31, 2024 at 16:43

License

GPL-3

Total Downloads

18.1K

Supported Platforms

noarch