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bioconductor-scgps

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A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation)

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-scgps

Usage Tracking

1.20.0
1.16.0
1.14.1
1.12.0
1.8.0
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Downloads (Last 6 months): 0

Description

The package implements two main algorithms to answer two key questions: a SCORE (Stable Clustering at Optimal REsolution) to find subpopulations, followed by scGPS to investigate the relationships between subpopulations.

About

Summary

A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation)

Last Updated

Dec 21, 2024 at 22:54

License

GPL-3

Total Downloads

19.8K

Supported Platforms

linux-64
macOS-64