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bioconductor-rcaspar

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A package for survival time prediction based on a piecewise baseline hazard Cox regression model.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-rcaspar

Usage Tracking

1.52.0
1.48.0
1.46.0
1.44.0
1.40.0
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Downloads (Last 6 months): 0

Description

The package is the R-version of the C-based software \bold{CASPAR} (Kaderali,2006: \url{http://bioinformatics.oxfordjournals.org/content/22/12/1495}). It is meant to help predict survival times in the presence of high-dimensional explanatory covariates. The model is a piecewise baseline hazard Cox regression model with an Lq-norm based prior that selects for the most important regression coefficients, and in turn the most relevant covariates for survival analysis. It was primarily tried on gene expression and aCGH data, but can be used on any other type of high-dimensional data and in disciplines other than biology and medicine.

About

Summary

A package for survival time prediction based on a piecewise baseline hazard Cox regression model.

Last Updated

Dec 14, 2024 at 18:41

License

GPL (>=3)

Total Downloads

42.3K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.26.0
macOS-64 Last supported version: 1.26.0