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bioconductor-rbec

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Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-rbec

Usage Tracking

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Description

Rbec is a adapted version of DADA2 for analyzing amplicon sequencing data from synthetic communities (SynComs), where the reference sequences for each strain exists. Rbec can not only accurately profile the microbial compositions in SynComs, but also predict the contaminants in SynCom samples.

About

Summary

Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities

Last Updated

Dec 22, 2024 at 12:08

License

LGPL-3

Total Downloads

11.9K

Supported Platforms

linux-64
macOS-64