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bioconductor-ppinfer

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Inferring functionally related proteins using protein interaction networks

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-ppinfer

Usage Tracking

1.32.0
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Downloads (Last 6 months): 0

Description

Interactions between proteins occur in many, if not most, biological processes. Most proteins perform their functions in networks associated with other proteins and other biomolecules. This fact has motivated the development of a variety of experimental methods for the identification of protein interactions. This variety has in turn ushered in the development of numerous different computational approaches for modeling and predicting protein interactions. Sometimes an experiment is aimed at identifying proteins closely related to some interesting proteins. A network based statistical learning method is used to infer the putative functions of proteins from the known functions of its neighboring proteins on a PPI network. This package identifies such proteins often involved in the same or similar biological functions.

About

Summary

Inferring functionally related proteins using protein interaction networks

Last Updated

Dec 21, 2024 at 07:40

License

Artistic-2.0

Total Downloads

35.8K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.6.0
macOS-64 Last supported version: 1.4.0