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bioconductor-past

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Pathway Association Study Tool (PAST)

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-past

Usage Tracking

1.22.0
1.18.0
1.16.0
1.14.0
1.10.0
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Downloads (Last 6 months): 0

Description

PAST takes GWAS output and assigns SNPs to genes, uses those genes to find pathways associated with the genes, and plots pathways based on significance. Implements methods for reading GWAS input data, finding genes associated with SNPs, calculating enrichment score and significance of pathways, and plotting pathways.

About

Summary

Pathway Association Study Tool (PAST)

Last Updated

Dec 26, 2024 at 19:05

License

GPL (>=3) + file LICENSE

Total Downloads

17.3K

Supported Platforms

noarch