bioconductor-pareg
Pathway enrichment using a regularized regression approach
Pathway enrichment using a regularized regression approach
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Compute pathway enrichment scores while accounting for term-term relations. This package uses a regularized multiple linear regression to regress differential expression p-values obtained from multi-condition experiments on a pathway membership matrix. By doing so, it is able to incorporate additional biological knowledge into the enrichment analysis and to estimate pathway enrichment scores more robustly.
Summary
Pathway enrichment using a regularized regression approach
Last Updated
Dec 21, 2023 at 19:53
License
GPL-3
Total Downloads
3.1K
Supported Platforms