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bioconductor-packfinder

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de novo Annotation of Pack-TYPE Transposable Elements

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-packfinder

Usage Tracking

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Description

Algorithm and tools for in silico pack-TYPE transposon discovery. Filters a given genome for properties unique to DNA transposons and provides tools for the investigation of returned matches. Sequences are input in DNAString format, and ranges are returned as a dataframe (in the format returned by as.dataframe(GRanges)).

About

Summary

de novo Annotation of Pack-TYPE Transposable Elements

Last Updated

Dec 19, 2024 at 22:52

License

GPL-2

Total Downloads

15.9K

Supported Platforms

noarch