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Identifying Genes Overexpressed in Subsets of Tumors from Tumor-Normal mRNA Expression Data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-oncomix

Usage Tracking

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Description

This package helps identify mRNAs that are overexpressed in subsets of tumors relative to normal tissue. Ideal inputs would be paired tumor-normal data from the same tissue from many patients (>15 pairs). This unsupervised approach relies on the observation that oncogenes are characteristically overexpressed in only a subset of tumors in the population, and may help identify oncogene candidates purely based on differences in mRNA expression between previously unknown subtypes.

About

Summary

Identifying Genes Overexpressed in Subsets of Tumors from Tumor-Normal mRNA Expression Data

Last Updated

Dec 21, 2024 at 23:28

License

GPL-3

Total Downloads

23.6K

Supported Platforms

noarch