bioconductor-odseq
Outlier detection in multiple sequence alignments
Outlier detection in multiple sequence alignments
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Performs outlier detection of sequences in a multiple sequence alignment using bootstrap of predefined distance metrics. Outlier sequences can make downstream analyses unreliable or make the alignments less accurate while they are being constructed. This package implements the OD-seq algorithm proposed by Jehl et al (doi 10.1186/s12859-015-0702-1) for aligned sequences and a variant using string kernels for unaligned sequences.
Summary
Outlier detection in multiple sequence alignments
Last Updated
Feb 28, 2026 at 18:30
License
MIT + file LICENSE
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