CMD + K

bioconductor-nucleosim

Community

Generate synthetic nucleosome maps

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-nucleosim

Usage Tracking

1.34.0
1.30.0
1.28.0
1.26.0
1.22.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

This package can generate a synthetic map with reads covering the nucleosome regions as well as a synthetic map with forward and reverse reads emulating next-generation sequencing. The synthetic hybridization data of “Tiling Arrays” can also be generated. The user has choice between three different distributions for the read positioning: Normal, Student and Uniform. In addition, a visualization tool is provided to explore the synthetic nucleosome maps.

About

Summary

Generate synthetic nucleosome maps

Last Updated

Dec 18, 2024 at 23:14

License

Artistic-2.0

Total Downloads

40.9K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.8.0
macOS-64 Last supported version: 1.8.0