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bioconductor-msstatslobd

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Assay characterization: estimation of limit of blanc(LoB) and limit of detection(LOD)

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-msstatslobd

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Description

The MSstatsLOBD package allows calculation and visualization of limit of blac (LOB) and limit of detection (LOD). We define the LOB as the highest apparent concentration of a peptide expected when replicates of a blank sample containing no peptides are measured. The LOD is defined as the measured concentration value for which the probability of falsely claiming the absence of a peptide in the sample is 0.05, given a probability 0.05 of falsely claiming its presence. These functionalities were previously a part of the MSstats package. The methodology is described in Galitzine (2018) .

About

Summary

Assay characterization: estimation of limit of blanc(LoB) and limit of detection(LOD)

Last Updated

Dec 14, 2024 at 15:20

License

Artistic-2.0

Total Downloads

11.1K

Supported Platforms

linux-64
macOS-64