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bioconductor-metcirc

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Navigating mass spectral similarity in high-resolution MS/MS metabolomics data metabolomics data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-metcirc

Usage Tracking

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Description

MetCirc comprises a workflow to interactively explore high-resolution MS/MS metabolomics data. MetCirc uses the Spectra object infrastructure defined in the package Spectra that stores MS/MS spectra. MetCirc offers functionality to calculate similarity between precursors based on the normalised dot product, neutral losses or user-defined functions and visualise similarities in a circular layout. Within the interactive framework the user can annotate MS/MS features based on their similarity to (known) related MS/MS features.

About

Summary

Navigating mass spectral similarity in high-resolution MS/MS metabolomics data metabolomics data

Last Updated

Dec 20, 2024 at 00:00

License

GPL (>= 3)

Total Downloads

40.9K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.10.0
macOS-64 Last supported version: 1.10.0