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bioconductor-metavizr

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R Interface to the metaviz web app for interactive metagenomics data analysis and visualization

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-metavizr

Usage Tracking

1.21.0
1.18.0
1.15.0
1.14.0
1.12.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

This package provides Websocket communication to the metaviz web app (http://metaviz.cbcb.umd.edu) for interactive visualization of metagenomics data. Objects in R/bioc interactive sessions can be displayed in plots and data can be explored using a facetzoom visualization. Fundamental Bioconductor data structures are supported (e.g., MRexperiment objects), while providing an easy mechanism to support other data structures. Visualizations (using d3.js) can be easily added to the web app as well.

About

Summary

R Interface to the metaviz web app for interactive metagenomics data analysis and visualization

Last Updated

Nov 9, 2022 at 11:28

License

MIT + file LICENSE

Total Downloads

24.8K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.2.1
macOS-64 Last supported version: 1.2.1