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bioconductor-metapone

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Conducts pathway test of metabolomics data using a weighted permutation test

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-metapone

Usage Tracking

1.12.0
1.8.0
1.6.0
1.4.0
1.0.0
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Downloads (Last 6 months): 0

Description

The package conducts pathway testing from untargetted metabolomics data. It requires the user to supply feature-level test results, from case-control testing, regression, or other suitable feature-level tests for the study design. Weights are given to metabolic features based on how many metabolites they could potentially match to. The package can combine positive and negative mode results in pathway tests.

About

Summary

Conducts pathway test of metabolomics data using a weighted permutation test

Last Updated

Dec 15, 2024 at 06:37

License

Artistic-2.0

Total Downloads

6.7K

Supported Platforms

noarch