bioconductor-martini
GWAS Incorporating Networks
GWAS Incorporating Networks
To install this package, run one of the following:
martini deals with the low power inherent to GWAS studies by using prior knowledge represented as a network. SNPs are the vertices of the network, and the edges represent biological relationships between them (genomic adjacency, belonging to the same gene, physical interaction between protein products). The network is scanned using SConES, which looks for groups of SNPs maximally associated with the phenotype, that form a close subnetwork.
Summary
GWAS Incorporating Networks
Last Updated
Dec 17, 2024 at 16:57
License
GPL-3
Total Downloads
32.4K
Supported Platforms