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bioconductor-martini

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GWAS Incorporating Networks

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-martini

Usage Tracking

1.26.0
1.22.0
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Downloads (Last 6 months): 0

Description

martini deals with the low power inherent to GWAS studies by using prior knowledge represented as a network. SNPs are the vertices of the network, and the edges represent biological relationships between them (genomic adjacency, belonging to the same gene, physical interaction between protein products). The network is scanned using SConES, which looks for groups of SNPs maximally associated with the phenotype, that form a close subnetwork.

About

Summary

GWAS Incorporating Networks

Last Updated

Dec 17, 2024 at 16:57

License

GPL-3

Total Downloads

32.4K

Supported Platforms

linux-64
macOS-64
linux-aarch64