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bioconductor-hpastainr

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Queries the Human Protein Atlas Staining Data for Multiple Proteins and Genes

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-hpastainr

Usage Tracking

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Downloads (Last 6 months): 0

Description

This package is built around the HPAStainR function. The purpose of the HPAStainR function is to query the visual staining data in the Human Protein Atlas to return a table of staining ranked cell types. The function also has multiple arguments to personalize to output as well to include cancer data, csv readable names, modify the confidence levels of the results and more. The other functions exist exclusively to easily acquire the data required to run HPAStainR.

About

Summary

Queries the Human Protein Atlas Staining Data for Multiple Proteins and Genes

Last Updated

Jul 7, 2023 at 11:33

License

Artistic-2.0

Total Downloads

12.8K

Supported Platforms

noarch