bioconductor-goatea
Interactive Exploration of GSEA by the GOAT Method
Interactive Exploration of GSEA by the GOAT Method
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Geneset Ordinal Association Test Enrichment Analysis (GOATEA) provides a 'Shiny' interface with interactive visualizations and utility functions for performing and exploring automated gene set enrichment analysis using the 'GOAT' package. 'GOATEA' is designed to support large-scale and user-friendly enrichment workflows across multiple gene lists and comparisons, with flexible plotting and output options. Visualizations pre-enrichment include interactive 'Volcano' and 'UpSet' (overlap) plots. Visualizations post-enrichment include interactive geneset dotplot, geneset treeplot, gene-effectsize heatmap, gene-geneset heatmap and 'STRING' database of protein-protein-interactions network graph. 'GOAT' reference: Frank Koopmans (2024) .
Summary
Interactive Exploration of GSEA by the GOAT Method
Last Updated
Mar 15, 2026 at 17:28
License
Apache License (>= 2)
Supported Platforms