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bioconductor-geotcgadata

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Processing Various Types of Data on GEO and TCGA

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-geotcgadata

Usage Tracking

2.6.0
2.2.0
2.0.0
3 / 8 versions selected
Downloads (Last 6 months): 0

Description

Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA) provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP and Copy number variation data. It's easy to download data from TCGA using the gdc tool, but processing these data into a format suitable for bioinformatics analysis requires more work. This R package was developed to handle these data.

About

Summary

Processing Various Types of Data on GEO and TCGA

Last Updated

Dec 22, 2024 at 13:52

License

Artistic-2.0

Total Downloads

3.0K

Supported Platforms

noarch