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bioconductor-genomation

Community

Summary, annotation and visualization of genomic data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-genomation

Usage Tracking

1.38.0
1.34.0
1.32.0
1.30.0
1.26.0
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Downloads (Last 6 months): 0

Description

A package for summary and annotation of genomic intervals. Users can visualize and quantify genomic intervals over pre-defined functional regions, such as promoters, exons, introns, etc. The genomic intervals represent regions with a defined chromosome position, which may be associated with a score, such as aligned reads from HT-seq experiments, TF binding sites, methylation scores, etc. The package can use any tabular genomic feature data as long as it has minimal information on the locations of genomic intervals. In addition, It can use BAM or BigWig files as input.

About

Summary

Summary, annotation and visualization of genomic data

Last Updated

Dec 22, 2024 at 13:12

License

Artistic-2.0

Total Downloads

71.2K

Supported Platforms

linux-64
macOS-64
linux-aarch64