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bioconductor-gemini

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GEMINI: Variational inference approach to infer genetic interactions from pairwise CRISPR screens

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-gemini

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Description

GEMINI uses log-fold changes to model sample-dependent and independent effects, and uses a variational Bayes approach to infer these effects. The inferred effects are used to score and identify genetic interactions, such as lethality and recovery. More details can be found in Zamanighomi et al. 2019 (in press).

About

Summary

GEMINI: Variational inference approach to infer genetic interactions from pairwise CRISPR screens

Last Updated

Dec 14, 2024 at 16:46

License

BSD_3_clause + file LICENSE

Total Downloads

18.8K

Supported Platforms

noarch