bioconductor-fastreer
Phylogenetic, Distance and Other Calculations on VCF and Fasta Files
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Description
Calculate distances, build phylogenetic trees or perform hierarchical clustering between the samples of a VCF or FASTA file. Functions are implemented in Java and called via rJava. Parallel implementation that operates directly on the VCF or FASTA file for fast execution.
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Summary
Phylogenetic, Distance and Other Calculations on VCF and Fasta Files
Last Updated
Dec 14, 2024 at 16:36
License
GPL-3
Total Downloads
4.7K
Supported Platforms
noarch