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bioconductor-excluderanges

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Genomic coordinates of problematic genomic regions

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-excluderanges

Usage Tracking

0.99.8
0.99.6
2 / 8 versions selected
Downloads (Last 6 months): 0

Description

Genomic coordinates of problematic genomic regions that should be avoided when working with genomic data. GRanges of exclusion regions (formerly known as blacklisted), centromeres, telomeres, known heterochromatin regions, etc. (UCSC 'gap' table data). Primarily for human and mouse genomes, hg19/hg38 and mm9/mm10 genome assemblies.

About

Summary

Genomic coordinates of problematic genomic regions

Last Updated

Jul 11, 2023 at 11:08

License

MIT + file LICENSE

Total Downloads

3.3K

Supported Platforms

noarch