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bioconductor-escher

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Unified multi-dimensional visualizations with Gestalt principles

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-escher

Usage Tracking

1.6.0
1.2.0
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Downloads (Last 6 months): 0

Description

The creation of effective visualizations is a fundamental component of data analysis. In biomedical research, new challenges are emerging to visualize multi-dimensional data in a 2D space, but current data visualization tools have limited capabilities. To address this problem, we leverage Gestalt principles to improve the design and interpretability of multi-dimensional data in 2D data visualizations, layering aesthetics to display multiple variables. The proposed visualization can be applied to spatially-resolved transcriptomics data, but also broadly to data visualized in 2D space, such as embedding visualizations. We provide this open source R package escheR, which is built off of the state-of-the-art ggplot2 visualization framework and can be seamlessly integrated into genomics toolboxes and workflows.

About

Summary

Unified multi-dimensional visualizations with Gestalt principles

Last Updated

Dec 22, 2024 at 12:42

License

MIT + file LICENSE

Total Downloads

2.7K

Supported Platforms

noarch