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bioconductor-dropletutils

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Utilities for Handling Single-Cell Droplet Data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-dropletutils

Usage Tracking

1.26.0
1.22.0
1.20.0
1.18.0
1.14.2
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Downloads (Last 6 months): 0

Description

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

About

Summary

Utilities for Handling Single-Cell Droplet Data

Last Updated

Dec 21, 2024 at 05:29

License

GPL-3

Total Downloads

64.8K

Supported Platforms

linux-64
macOS-64
linux-aarch64