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bioconductor-dnafusion

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Identification of gene fusions using paired-end sequencing

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-dnafusion

Usage Tracking

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Description

DNAfusion can identify gene fusions such as EML4-ALK based on paired-end sequencing results. This package was developed using position deduplicated BAM files generated with the AVENIO Oncology Analysis Software. These files are made using the AVENIO ctDNA surveillance kit and Illumina Nextseq 500 sequencing. This is a targeted hybridization NGS approach and includes ALK-specific but not EML4-specific probes.

About

Summary

Identification of gene fusions using paired-end sequencing

Last Updated

Jan 3, 2025 at 16:34

License

GPL-3

Total Downloads

5.0K

Supported Platforms

noarch