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bioconductor-dasper

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Detecting abberant splicing events from RNA-sequencing data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-dasper

Usage Tracking

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Description

The aim of dasper is to detect aberrant splicing events from RNA-seq data. dasper will use as input both junction and coverage data from RNA-seq to calculate the deviation of each splicing event in a patient from a set of user-defined controls. dasper uses an unsupervised outlier detection algorithm to score each splicing event in the patient with an outlier score representing the degree to which that splicing event looks abnormal.

About

Summary

Detecting abberant splicing events from RNA-sequencing data

Last Updated

Jul 15, 2023 at 13:46

License

Artistic-2.0

Total Downloads

11.9K

Supported Platforms

noarch