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bioconductor-crisprbwa

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BWA-based alignment of CRISPR gRNA spacer sequences

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-crisprbwa

Usage Tracking

1.6.0
1.4.0
1.2.0
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Downloads (Last 6 months): 0

Description

Provides a user-friendly interface to map on-targets and off-targets of CRISPR gRNA spacer sequences using bwa. The alignment is fast, and can be performed using either commonly-used or custom CRISPR nucleases. The alignment can work with any reference or custom genomes. Currently not supported on Windows machines.

About

Summary

BWA-based alignment of CRISPR gRNA spacer sequences

Last Updated

Dec 22, 2023 at 19:44

License

MIT + file LICENSE

Total Downloads

4.6K

Supported Platforms

noarch