bioconductor-cpsm
CPSM: Cancer patient survival model
CPSM: Cancer patient survival model
To install this package, run one of the following:
CPSM provides a comprehensive computational pipeline for predicting survival probability and risk groups in cancer patients. The package includes steps for data preprocessing, training/test split, and normalization. It enables feature selection using univariate survival analysis and computes a LASSO-based prognostic index (PI) score. CPSM supports the development of predictive models using various feature sets and offers a suite of visualization tools, including survival curves based on predicted probabilities, barplots for predicted mean and median survival times, KM plots overlaid with individual survival predictions, and nomograms for estimating 1-, 3-, 5-, and 10-year survival probabilities. This makes CPSM a versatile tool for survival analysis in cancer research.
Summary
CPSM: Cancer patient survival model
Last Updated
Mar 15, 2026 at 00:02
License
GPL-3 | file LICENSE
Supported Platforms