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bioconductor-clusterfoldsimilarity

Community

Calculate similarity of clusters from different single cell samples using foldchanges

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-clusterfoldsimilarity

Usage Tracking

1.2.0
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

This package calculates a similarity coefficient using the fold changes of shared features (e.g. genes) among clusters of different samples/batches/datasets. The similarity coefficient is calculated using the dot-product (Hadamard product) of every pairwise combination of Fold Changes between a source cluster i of sample/dataset n and all the target clusters j in sample/dataset m

About

Summary

Calculate similarity of clusters from different single cell samples using foldchanges

Last Updated

Dec 24, 2024 at 22:36

License

Artistic-2.0

Total Downloads

427

Supported Platforms

noarch