bioconductor-chipxpress
ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles
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Description
ChIPXpress takes as input predicted TF bound genes from ChIPx data and uses a corresponding database of gene expression profiles downloaded from NCBI GEO to rank the TF bound targets in order of which gene is most likely to be functional TF target.
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Summary
ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles
Last Updated
Nov 6, 2022 at 19:42
License
GPL(>=2)
Total Downloads
28.6K
Supported Platforms
noarch
Unsupported Platforms
linux-64 Last supported version: 1.24.0
macOS-64 Last supported version: 1.24.0