bioconductor-cfdnakit
Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA)
Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA)
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This package provides basic functions for analyzing shallow whole-genome sequencing (~0.3X or more) of cell-free DNA (cfDNA). The package basically extracts the length of cfDNA fragments and aids the vistualization of fragment-length information. The package also extract fragment-length information per non-overlapping fixed-sized bins and used it for calculating ctDNA estimation score (CES).
Summary
Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA)
Last Updated
Dec 24, 2024 at 08:59
License
GPL-3
Total Downloads
1.4K
Supported Platforms