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bioconductor-cexor

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An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-cexor

Usage Tracking

1.44.0
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Description

Strand specific peak-pair calling in ChIP-exo replicates. The cumulative Skellam distribution function is used to detect significant normalised count differences of opposed sign at each DNA strand (peak-pairs). Then, irreproducible discovery rate for overlapping peak-pairs across biological replicates is computed.

About

Summary

An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates

Last Updated

Dec 31, 2024 at 19:14

License

Artistic-2.0 | GPL-2 + file LICENSE

Total Downloads

44.1K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.18.0
macOS-64 Last supported version: 1.18.0